Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913352.1_cds_XP_016463391.1_56519
CDS Infomation

[gene=LOC107786439] [db_xref=GeneID:107786439] [protein=EGF domain-specific O-linked N-acetylglucosamine transferase-like] [protein_id=XP_016463391.1] [location=join(21652..21865,21971..22048,22557..23836)] [gbkey=CDS]
Sequence

ATGTTGAAGAAAATGGTGCAGTACCAAAGATATCAGCAGTGGAAGAAAGGGGATGAGCTT
GTTGTTTGTTTAGACGAGGAGTCAGTTTTTGAAAACACTAATCACACCAAAAGATCAAGA
CTCAAGCTTTTGTTTCTCCTCTTGCTATCTTTCATCTCTTTTAGCTTTTTTTTAGCTCCT
CATTTCTTCACTTCTTCCTCTACTTTTTCTCTATATTCATTTGGTTTTGAGGATGAAGGG
CTTGTTTCTACATCAGATGTATATGCTTCTGTTTGTTCCTCTGTCTCTAATGGGTCAATT
TGTTGTGATAGAAGTAGCATTCGGTCAGATATCTGTGTAATGAAAGGAGATGTAAGAACA
AATTCTGCTTCCTCCACAATTACCCTTTACAGAAACAATGGTTATGGCAGCCAAGTATTT
GGGGCCTCTGGTGACAATGATGAGATATTCCAACACGAAAAGATTAGGCCGTATACTCGA
AAATGGGAAAAAAGTGTAATGGACACTATCGATGAATTAGACCTTGTTTTGAAGGGAGAG
AATAATGGTATTCATCAGAAGTGTGATGTCCAACATGATGTACCTGCTGTGTTCTTTTCC
ACTGGAGGTTACACGGGTAATCTTTACCACGAATTCAATGATGGGATTTTGCCTCTTTAC
ATCACTTCTCAGCATTTCAACAAGAAAGTTGTATTTGTAATCCTTGAGTATCATGATTGG
TGGATTTCAAAGTACGAGAACATACTGCCTCACCTCACTGAATATCCTATTATCGACTTT
AGTGGAGATAATAGGACTCACTGTTTCCCTGAAGCCATAGTTGGTTTAAAAATACATGAT
GAGCTAACTATCGATCCTTCATTGATGAGAGGCAATGGGAGTATTAGAGATTTCCGAGAC
ATGCTAGACCGAGCTTATTTGCCTCGAATTAGAGGGTTGATCCAAAAAGAGGAACCAGAT
AGACTTGCTTTGTCACCGTCAGCTAAGACAAAGATAGAGATGACTGAAGAAAAGCTGGAT
TCAAAGAAACCTAAAGTGGTCATAATAGCCAGAAATGATTCAAGAGCAATACTGAATGAA
GATTCATTAGTTAAAATGGCACAAGATATTGGGTTCCAAGTGGAAGTTTTGTGGCCTCAA
CGAACGACTGAGCTTGCAAGGATCTATCGAGCTCTTAATTCCAGCGATGTTATGATTGGA
GTTCATGGTGCTGCTATGACTCATTTCCTCTTCATGCGGCCTGAATCCGTTTTCATCCAA
ATCGTTCCACTGGGAACAGATTGGGCAGCAGACACTTATTATGGACAACCAGCAGTGAAA
TTAGGTCTCAAGTACATTGGCTACAAAATCCTTCCACAAGAGAGCTCTTTGTACAATGAG
TACAAGAAAACTGATCCTGTTCTAACGGACCCGGACAGTGTGAACAACAGAGGATGGGAA
TTCACAAAAAAGATCTACCTTGATCGTCAAAATGTGAGATTGAACCTTCGGAGGTTCCAT
AAGAGATTGCTTCGTGCCTATTATTATTCTGTTGCAAAGAAGAATGGGCGTCGCCATCAT
CAAAATCAGTAA

Peptide Sequence

PEP ID

XP_016463391.1
PEP Infomation

PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase-like [Nicotiana tabacum]
Sequence

MLKKMVQYQRYQQWKKGDELVVCLDEESVFENTNHTKRSRLKLLFLLLLSFISFSFFLAP
HFFTSSSTFSLYSFGFEDEGLVSTSDVYASVCSSVSNGSICCDRSSIRSDICVMKGDVRT
NSASSTITLYRNNGYGSQVFGASGDNDEIFQHEKIRPYTRKWEKSVMDTIDELDLVLKGE
NNGIHQKCDVQHDVPAVFFSTGGYTGNLYHEFNDGILPLYITSQHFNKKVVFVILEYHDW
WISKYENILPHLTEYPIIDFSGDNRTHCFPEAIVGLKIHDELTIDPSLMRGNGSIRDFRD
MLDRAYLPRIRGLIQKEEPDRLALSPSAKTKIEMTEEKLDSKKPKVVIIARNDSRAILNE
DSLVKMAQDIGFQVEVLWPQRTTELARIYRALNSSDVMIGVHGAAMTHFLFMRPESVFIQ
IVPLGTDWAADTYYGQPAVKLGLKYIGYKILPQESSLYNEYKKTDPVLTDPDSVNNRGWE
FTKKIYLDRQNVRLNLRRFHKRLLRAYYYSVAKKNGRRHHQNQ

Transcript Sequence

Gene sequence data has not been registered.